wc_cli documentation

Integrated user interface for whole-cell models and whole-cell modeling tools

The integrated user interface provides modelers the following capabilities:

• Display the available models and tools
• Display the available operations for each model and tool
• Run whole-cell models and whole-cell modeling tools

Contents

• 1. Installation
  • 1.1. Prerequisites
  • 1.2. Latest revision from GitHub
• 2. Tutorial
  • 2.1. Models
    • 2.1.1. List the available models
    • 2.1.2. Get the available operations for a model
    • 2.1.3. Run a model operation
  • 2.2. Tools
    • 2.2.1. List the available tools
    • 2.2.2. Get the operations for a tool
    • 2.2.3. Run an operation of a tool
  • 2.3. Help
    • 2.3.1. Get help
• 3. About
  • 3.1. License
  • 3.2. Development team
  • 3.3. Acknowledgements
  • 3.4. Questions and comments